{
  "_id": "6a17ed98acfb0bcc41da4cf2",
  "Package": "DiscreteFDR",
  "Type": "Package",
  "Title": "FDR Based Multiple Testing Procedures with Adaptation for\nDiscrete Tests",
  "Version": "2.1.1",
  "Date": "2026-02-13",
  "Authors@R": "c(\nperson(\"Sebastian\", \"Döhler\", role = c(\"aut\", \"ctb\"),\nemail = \"sebastian.doehler@h-da.de\",\ncomment = c(ORCID = \"0000-0002-0321-6355\")),\nperson(\"Florian\", \"Junge\", role = c(\"aut\", \"ctb\", \"cre\"),\nemail = \"diso.fbmn@h-da.de\",\ncomment = c(ORCID = \"0009-0001-6856-6938\")),\nperson(\"Guillermo\", \"Durand\", role = c(\"aut\", \"ctb\"),\ncomment = c(ORCID = \"0000-0003-4056-5631\")),\nperson(\"Etienne\", \"Roquain\", role = \"ctb\"),\nperson(\"Christina\", \"Kihn\", role = \"ctb\")\n)",
  "Description": "Implementations of the multiple testing procedures for\ndiscrete tests described in the paper Döhler, Durand and\nRoquain (2018) \"New FDR bounds for discrete and heterogeneous\ntests\" <doi:10.1214/18-EJS1441>. The main procedures of the\npaper (HSU and HSD), their adaptive counterparts (AHSU and\nAHSD), and the HBR variant are available and are coded to take\nas input the results of a test procedure from package\n'DiscreteTests', or a set of observed p-values and their\ndiscrete support under their nulls. A shortcut function to\nobtain such p-values and supports is also provided, along with\na wrapper allowing to apply discrete procedures directly to\ndata.",
  "License": "GPL-3",
  "Language": "en-US",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr, R.rsp",
  "URL": "https://github.com/DISOhda/DiscreteFDR",
  "BugReports": "https://github.com/DISOhda/DiscreteFDR/issues",
  "RoxygenNote": "7.3.3",
  "Roxygen": "list(markdown = TRUE)",
  "Repository": "https://disohda.r-universe.dev",
  "Date/Publication": "2026-02-13 09:24:18 UTC",
  "RemoteUrl": "https://github.com/disohda/discretefdr",
  "RemoteRef": "HEAD",
  "RemoteSha": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-28 07:05:24 UTC",
    "User": "root"
  },
  "Author": "Sebastian Döhler [aut, ctb] (ORCID:\n<https://orcid.org/0000-0002-0321-6355>),\nFlorian Junge [aut, ctb, cre] (ORCID:\n<https://orcid.org/0009-0001-6856-6938>),\nGuillermo Durand [aut, ctb] (ORCID:\n<https://orcid.org/0000-0003-4056-5631>),\nEtienne Roquain [ctb],\nChristina Kihn [ctb]",
  "Maintainer": "Florian Junge <diso.fbmn@h-da.de>",
  "MD5sum": "81409084c73ba3e8470a5abbdda7829a",
  "_user": "disohda",
  "_type": "src",
  "_file": "DiscreteFDR_2.1.1.tar.gz",
  "_fileid": "5983fba579467839d0f4035a7440e00c26bb56269468732bceb8ea56d05d586f",
  "_filesize": 1457418,
  "_sha256": "5983fba579467839d0f4035a7440e00c26bb56269468732bceb8ea56d05d586f",
  "_created": "2026-05-28T07:05:24.000Z",
  "_published": "2026-05-28T07:24:08.060Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78240813831,
      "time": 156,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7259739807"
    },
    {
      "job": 78240813772,
      "time": 205,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7259752118"
    },
    {
      "job": 78240813770,
      "time": 178,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259745353"
    },
    {
      "job": 78240813867,
      "time": 199,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259750557"
    },
    {
      "job": 78240813687,
      "time": 96,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7259922410"
    },
    {
      "job": 78240813645,
      "time": 435,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7259991796"
    },
    {
      "job": 78240813790,
      "time": 138,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259825171"
    },
    {
      "job": 78240813745,
      "time": 326,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259846248"
    },
    {
      "job": 78240311331,
      "time": 226,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259697198"
    },
    {
      "job": 78240813637,
      "time": 140,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259735292"
    },
    {
      "job": 78240813656,
      "time": 180,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7259746569"
    },
    {
      "job": 78240813715,
      "time": 149,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7259737708"
    },
    {
      "job": 78240813657,
      "time": 148,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7259737483"
    }
  ],
  "_buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/disohda/discretefdr",
  "_commit": {
    "id": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
    "author": "DISOhda <diso.fbmn@h-da.de>",
    "committer": "DISOhda <diso.fbmn@h-da.de>",
    "message": "Prepare release\n",
    "time": 1770974658
  },
  "_maintainer": {
    "name": "Florian Junge",
    "email": "diso.fbmn@h-da.de",
    "login": "disohda",
    "description": "",
    "uuid": 85945308
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.00",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.12",
      "role": "Imports"
    },
    {
      "package": "DiscreteTests",
      "version": ">= 0.2.1",
      "role": "Imports"
    },
    {
      "package": "lifecycle",
      "role": "Imports"
    },
    {
      "package": "checkmate",
      "role": "Imports"
    },
    {
      "package": "DiscreteDatasets",
      "role": "Imports"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "R.rsp",
      "role": "Suggests"
    },
    {
      "package": "kableExtra",
      "role": "Suggests"
    }
  ],
  "_owner": "disohda",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2026-07",
      "n": 4
    }
  ],
  "_tags": [
    {
      "name": "2.1.1",
      "date": "2026-02-13"
    }
  ],
  "_stars": 4,
  "_contributors": [
    {
      "user": "disohda",
      "count": 119,
      "uuid": 85945308
    }
  ],
  "_userbio": {
    "uuid": 85945308,
    "type": "user",
    "name": "DISOhda"
  },
  "_downloads": {
    "count": 231,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/DiscreteFDR"
  },
  "_devurl": "https://github.com/disohda/discretefdr",
  "_searchresults": 17,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/DiscreteFDR.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/disohda/discretefdr",
  "_realowner": "disohda",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2018-07-10"
    },
    {
      "version": "1.1",
      "date": "2018-09-12"
    },
    {
      "version": "1.2",
      "date": "2019-01-07"
    },
    {
      "version": "1.3",
      "date": "2019-07-12"
    },
    {
      "version": "1.3-1",
      "date": "2019-07-14"
    },
    {
      "version": "1.3-2",
      "date": "2019-11-13"
    },
    {
      "version": "1.3-3",
      "date": "2019-11-16"
    },
    {
      "version": "1.3-4",
      "date": "2020-02-14"
    },
    {
      "version": "1.3.5",
      "date": "2021-05-25"
    },
    {
      "version": "1.3.6",
      "date": "2021-09-03"
    },
    {
      "version": "1.3.7",
      "date": "2024-02-09"
    },
    {
      "version": "2.0.0",
      "date": "2024-07-08"
    },
    {
      "version": "2.0.1",
      "date": "2024-10-24"
    },
    {
      "version": "2.1.0",
      "date": "2024-12-14"
    },
    {
      "version": "2.1.1",
      "date": "2026-02-16"
    }
  ],
  "_exports": [
    "ADBH",
    "DBH",
    "DBR",
    "DBY",
    "direct.discrete.BH",
    "discrete.BH",
    "fast.Discrete",
    "fisher.pvalues.support",
    "generate.pvalues"
  ],
  "_help": [
    {
      "page": "ADBH",
      "title": "Wrapper Functions for the Adaptive Discrete Benjamini-Hochberg Procedure",
      "topics": [
        "ADBH",
        "ADBH.default",
        "ADBH.DiscreteTestResults"
      ]
    },
    {
      "page": "DBH",
      "title": "Wrapper Functions for the Discrete Benjamini-Hochberg Procedure",
      "topics": [
        "DBH",
        "DBH.default",
        "DBH.DiscreteTestResults"
      ]
    },
    {
      "page": "DBR",
      "title": "The Discrete Blanchard-Roquain Procedure",
      "topics": [
        "DBR",
        "DBR.default",
        "DBR.DiscreteTestResults"
      ]
    },
    {
      "page": "DBY",
      "title": "The Discrete Benjamini-Yekutieli Procedure",
      "topics": [
        "DBY",
        "DBY.default",
        "DBY.DiscreteTestResults"
      ]
    },
    {
      "page": "direct.discrete.BH",
      "title": "Direct Application of Multiple Testing Procedures to Dataset",
      "topics": [
        "direct.discrete.BH"
      ]
    },
    {
      "page": "discrete.BH",
      "title": "The Discrete Benjamini-Hochberg Procedure",
      "topics": [
        "discrete.BH",
        "discrete.BH.default",
        "discrete.BH.DiscreteTestResults"
      ]
    },
    {
      "page": "DiscreteFDR",
      "title": "FDR-based Multiple Testing Procedures with Adaptation for Discrete Tests",
      "topics": [
        "DiscreteFDR-package",
        "DiscreteFDR"
      ]
    },
    {
      "page": "fast.Discrete",
      "title": "Fast Application of Discrete Multiple Testing Procedures",
      "topics": [
        "fast.Discrete"
      ]
    },
    {
      "page": "fisher.pvalues.support",
      "title": "Computing Discrete P-Values and Their Supports for Fisher's Exact Test",
      "topics": [
        "fisher.pvalues.support"
      ]
    },
    {
      "page": "generate.pvalues",
      "title": "Generation of P-Values and Their Supports After Data Transformations",
      "topics": [
        "generate.pvalues"
      ]
    },
    {
      "page": "hist.DiscreteFDR",
      "title": "Histogram of Raw P-Values",
      "topics": [
        "hist.DiscreteFDR"
      ]
    },
    {
      "page": "kernel",
      "title": "Kernel Functions",
      "topics": [
        "kernel",
        "kernel_ADBH_crit",
        "kernel_ADBH_fast",
        "kernel_DBH_crit",
        "kernel_DBH_fast",
        "kernel_DBR_crit",
        "kernel_DBR_fast",
        "kernel_DBY_crit",
        "kernel_DBY_fast"
      ]
    },
    {
      "page": "plot.DiscreteFDR",
      "title": "Plot Method for 'DiscreteFDR' objects",
      "topics": [
        "plot.DiscreteFDR"
      ]
    },
    {
      "page": "print.DiscreteFDR",
      "title": "Printing DiscreteFDR results",
      "topics": [
        "print.DiscreteFDR"
      ]
    },
    {
      "page": "summary.DiscreteFDR",
      "title": "Summarizing Discrete FDR Results",
      "topics": [
        "print.summary.DiscreteFDR",
        "summary.DiscreteFDR"
      ]
    }
  ],
  "_rundeps": [
    "backports",
    "checkmate",
    "cli",
    "DiscreteDatasets",
    "DiscreteTests",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "R6",
    "Rcpp",
    "RcppArmadillo",
    "rlang",
    "tibble",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "toyexample.Rmd",
      "filename": "toyexample.html",
      "title": "A Toy Example",
      "engine": "knitr::rmarkdown",
      "headings": [
        "1. A Toy Example"
      ],
      "created": "2024-07-03 14:55:43",
      "modified": "2026-02-13 09:00:32",
      "commits": 4
    },
    {
      "source": "DiscreteFDR_vignette.pdf.asis",
      "filename": "DiscreteFDR_vignette.pdf",
      "title": "DiscreteFDR: An R package for controlling the false discovery rate for discrete test statistics",
      "engine": "R.rsp::asis",
      "headings": [],
      "created": "2021-07-28 12:42:13",
      "modified": "2024-07-03 14:55:43",
      "commits": 2
    },
    {
      "source": "furtheranalyses.Rmd",
      "filename": "furtheranalyses.html",
      "title": "Further Analyses",
      "engine": "knitr::rmarkdown",
      "headings": [
        "2. Further Analyses",
        "2.1. Analysis of Pharmacovigilance Data",
        "2.2. Other Types of Discrete Tests"
      ],
      "created": "2024-07-03 14:55:43",
      "modified": "2026-02-13 09:00:32",
      "commits": 6
    },
    {
      "source": "DiscreteFDR.Rmd",
      "filename": "DiscreteFDR.html",
      "title": "Introduction to DiscreteFDR",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2021-07-28 12:42:13",
      "modified": "2024-07-03 14:55:43",
      "commits": 3
    }
  ],
  "_score": 5.212720154417843,
  "_indexed": true,
  "_nocasepkg": "discretefdr",
  "_universes": [
    "disohda"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.1.1",
      "date": "2026-05-28T07:07:53.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "649454011b073f91a791d9e921c84c81ea80197a573e5911ad1625084b4bb48a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.1.1",
      "date": "2026-05-28T07:08:40.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "16aa8d1261c355d94d4b9b4e6fa8a7a83f80d409a36a894687cf3ec5bcce6113",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.1.1",
      "date": "2026-05-28T07:08:14.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "fb408c1f4651dd11a2a85f224e3eb05acacb7106265326cbefc5cb8b6c8ef2b0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.1.1",
      "date": "2026-05-28T07:08:35.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "f3d6731a4cffe63167cd479b983f5b0c9734bbd2f7504a40548194103df0e958",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.1.1",
      "date": "2026-05-28T07:19:26.000Z",
      "arch": "aarch64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "e15e6c67b6c86f37c2fba5a82a488c826ef3d9d78619a2d394b0f202f2222fed",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.1.1",
      "date": "2026-05-28T07:21:33.000Z",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "2ef48986438f92fdc88137589033fbbdb1fdc1356027aec34dfd7e43c0184a94",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.1.1",
      "date": "2026-05-28T07:13:27.000Z",
      "arch": "aarch64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "60b28957fe996ba9a74d944438940df684785ab775d348010b9a2094e4803457",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.1.1",
      "date": "2026-05-28T07:13:42.000Z",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "739cffb2c0f68879213bf06adaf6ff616daa2776f76f1f9b2709f17a0374cccd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.1.1",
      "date": "2026-05-28T07:08:01.000Z",
      "arch": "emscripten",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "14e02dcab976ba31e54be24997a37f323d7f0f607e1e4a8abe83b5f5712ea7db",
      "status": "success",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.1.1",
      "date": "2026-05-28T07:07:32.000Z",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "21a39bdb6b32e90e72d877b31a9f690e44b5051a4ff5ddc2d65f303ced0c41f3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.1.1",
      "date": "2026-05-28T07:07:05.000Z",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "fd27e21a1c0b2d1ceaf2385eed980e996028e4a59e68b3db78ecd58320816f4e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.1.1",
      "date": "2026-05-28T07:07:08.000Z",
      "arch": "x86_64",
      "commit": "fadfbdbe41084aceefcbcc071aedb28b07acbc21",
      "fileid": "94320777cf7431cf8c5f01590e0b534af4e97de0b2985f655c958b4677e49692",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/disohda/actions/runs/26559956832"
    }
  ]
}