Package: FDX 1.0.8-240910
FDX: False Discovery Exceedance Controlling Multiple Testing Procedures
Multiple testing procedures for heterogeneous and discrete tests as described in Döhler and Roquain (2019) <arxiv:1912.04607v1>. The main algorithms of the paper are available as continuous, discrete and weighted versions. They take as input the results of a test procedure from package 'DiscreteTests', or a set of observed p-values and their discrete support under their nulls. A shortcut function to obtain such p-values and supports is also provided, along with wrappers allowing to apply discrete procedures directly to data.
Authors:
FDX_1.0.8-240910.tar.gz
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FDX.pdf |FDX.html✨
FDX/json (API)
NEWS
# Install 'FDX' in R: |
install.packages('FDX', repos = c('https://disohda.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/disohda/fdx/issues
Last updated 7 days agofrom:bf0305eeab. Checks:OK: 1 WARNING: 8. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 11 2024 |
R-4.5-win-x86_64 | WARNING | Aug 31 2024 |
R-4.5-linux-x86_64 | WARNING | Aug 31 2024 |
R-4.4-win-x86_64 | WARNING | Aug 31 2024 |
R-4.4-mac-x86_64 | WARNING | Aug 31 2024 |
R-4.4-mac-aarch64 | WARNING | Aug 31 2024 |
R-4.3-win-x86_64 | WARNING | Aug 31 2024 |
R-4.3-mac-x86_64 | WARNING | Aug 31 2024 |
R-4.3-mac-aarch64 | WARNING | Aug 31 2024 |
Exports:continuous.GRcontinuous.GR2continuous.LRcontinuous.LR2DGRdirect.discrete.GRdirect.discrete.LRdirect.discrete.PBdiscrete.GRdiscrete.GR2discrete.LRdiscrete.LR2discrete.PBdiscrete.PB2DLRDPBfast.Discrete.GRfast.Discrete.LRfast.Discrete.PBGRkernel_DGR_critkernel_DGR_fastkernel_DLR_critkernel_DLR_fastkernel_DPB_critkernel_DPB_fastkernel_wGR_fastkernel_wLR_fastkernel_wPB_fastLRNDGRNDLRNDPBNGRNLRrejection.pathweighted.GRweighted.GR2weighted.LRweighted.LR2weighted.PBweighted.PB2wGR.AMwGR.GMwLR.AMwLR.GMwPB.AMwPB.GM
Dependencies:backportscheckmatecliDiscreteDatasetsDiscreteFDRDiscreteTestsgluelifecyclePoissonBinomialpracmaR6RcppRcppArmadillorlang
Readme and manuals
Help Manual
Help page | Topics |
---|---|
False Discovery Exceedance (FDX) Control for Heterogeneous and Discrete Tests | FDX-package FDX |
Continuous Guo-Romano procedure | continuous.GR continuous.GR2 GR NGR |
Continuous Lehmann-Romano procedure | continuous.LR continuous.LR2 LR NLR |
Direct Application of Multiple Testing Procedures to Dataset | direct.Discrete direct.discrete.GR direct.discrete.LR direct.discrete.PB |
Discrete Guo-Romano procedure | DGR DGR.default DGR.DiscreteTestResults discrete.GR discrete.GR.default discrete.GR.DiscreteTestResults discrete.GR2 NDGR NDGR.default NDGR.DiscreteTestResults |
Discrete Lehmann-Romano procedure | discrete.LR discrete.LR.default discrete.LR.DiscreteTestResults discrete.LR2 DLR DLR.default DLR.DiscreteTestResults NDLR NDLR.default NDLR.DiscreteTestResults |
Discrete Poisson-Binomial procedure | discrete.PB discrete.PB.default discrete.PB.DiscreteTestResults discrete.PB2 DPB DPB.default DPB.DiscreteTestResults NDPB NDPB.default NDPB.DiscreteTestResults |
Fast application of discrete procedures | fast.Discrete fast.Discrete.GR fast.Discrete.LR fast.Discrete.PB |
Histogram of Raw p-Values | hist.FDX |
Kernel functions | kernel kernel_DGR_crit kernel_DGR_fast kernel_DLR_crit kernel_DLR_fast kernel_DPB_crit kernel_DPB_fast kernel_wGR_fast kernel_wLR_fast kernel_wPB_fast |
Plot Method for 'FDX' objects | plot.FDX |
Printing FDX results | print.FDX |
Rejection Path Plot (for 'FDX' objects) | rejection.path |
Summarizing Discrete FDX Results | print.summary.FDX summary.FDX |
Weighted Guo-Romano Procedure | weighted.GR weighted.GR2 wGR.AM wGR.GM |
Weighted Lehmann-Romano Procedure | weighted.LR weighted.LR2 wLR.AM wLR.GM |
Weighted Poisson-Binomial Procedure | weighted.PB weighted.PB2 wPB.AM wPB.GM |