Package: FDX 1.0.8-240910

FDX: False Discovery Exceedance Controlling Multiple Testing Procedures

Multiple testing procedures for heterogeneous and discrete tests as described in Döhler and Roquain (2019) <arxiv:1912.04607v1>. The main algorithms of the paper are available as continuous, discrete and weighted versions. They take as input the results of a test procedure from package 'DiscreteTests', or a set of observed p-values and their discrete support under their nulls. A shortcut function to obtain such p-values and supports is also provided, along with wrappers allowing to apply discrete procedures directly to data.

Authors:Sebastian Döhler [aut], Florian Junge [aut, cre], Etienne Roquain [ctb]

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FDX.pdf |FDX.html
FDX/json (API)
NEWS

# Install 'FDX' in R:
install.packages('FDX', repos = c('https://disohda.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/disohda/fdx/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

48 exports 2 stars 1.11 score 14 dependencies 283 downloads

Last updated 7 days agofrom:bf0305eeab. Checks:OK: 1 WARNING: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 11 2024
R-4.5-win-x86_64WARNINGAug 31 2024
R-4.5-linux-x86_64WARNINGAug 31 2024
R-4.4-win-x86_64WARNINGAug 31 2024
R-4.4-mac-x86_64WARNINGAug 31 2024
R-4.4-mac-aarch64WARNINGAug 31 2024
R-4.3-win-x86_64WARNINGAug 31 2024
R-4.3-mac-x86_64WARNINGAug 31 2024
R-4.3-mac-aarch64WARNINGAug 31 2024

Exports:continuous.GRcontinuous.GR2continuous.LRcontinuous.LR2DGRdirect.discrete.GRdirect.discrete.LRdirect.discrete.PBdiscrete.GRdiscrete.GR2discrete.LRdiscrete.LR2discrete.PBdiscrete.PB2DLRDPBfast.Discrete.GRfast.Discrete.LRfast.Discrete.PBGRkernel_DGR_critkernel_DGR_fastkernel_DLR_critkernel_DLR_fastkernel_DPB_critkernel_DPB_fastkernel_wGR_fastkernel_wLR_fastkernel_wPB_fastLRNDGRNDLRNDPBNGRNLRrejection.pathweighted.GRweighted.GR2weighted.LRweighted.LR2weighted.PBweighted.PB2wGR.AMwGR.GMwLR.AMwLR.GMwPB.AMwPB.GM

Dependencies:backportscheckmatecliDiscreteDatasetsDiscreteFDRDiscreteTestsgluelifecyclePoissonBinomialpracmaR6RcppRcppArmadillorlang

Readme and manuals

Help Manual

Help pageTopics
False Discovery Exceedance (FDX) Control for Heterogeneous and Discrete TestsFDX-package FDX
Continuous Guo-Romano procedurecontinuous.GR continuous.GR2 GR NGR
Continuous Lehmann-Romano procedurecontinuous.LR continuous.LR2 LR NLR
Direct Application of Multiple Testing Procedures to Datasetdirect.Discrete direct.discrete.GR direct.discrete.LR direct.discrete.PB
Discrete Guo-Romano procedureDGR DGR.default DGR.DiscreteTestResults discrete.GR discrete.GR.default discrete.GR.DiscreteTestResults discrete.GR2 NDGR NDGR.default NDGR.DiscreteTestResults
Discrete Lehmann-Romano procedurediscrete.LR discrete.LR.default discrete.LR.DiscreteTestResults discrete.LR2 DLR DLR.default DLR.DiscreteTestResults NDLR NDLR.default NDLR.DiscreteTestResults
Discrete Poisson-Binomial procedurediscrete.PB discrete.PB.default discrete.PB.DiscreteTestResults discrete.PB2 DPB DPB.default DPB.DiscreteTestResults NDPB NDPB.default NDPB.DiscreteTestResults
Fast application of discrete proceduresfast.Discrete fast.Discrete.GR fast.Discrete.LR fast.Discrete.PB
Histogram of Raw p-Valueshist.FDX
Kernel functionskernel kernel_DGR_crit kernel_DGR_fast kernel_DLR_crit kernel_DLR_fast kernel_DPB_crit kernel_DPB_fast kernel_wGR_fast kernel_wLR_fast kernel_wPB_fast
Plot Method for 'FDX' objectsplot.FDX
Printing FDX resultsprint.FDX
Rejection Path Plot (for 'FDX' objects)rejection.path
Summarizing Discrete FDX Resultsprint.summary.FDX summary.FDX
Weighted Guo-Romano Procedureweighted.GR weighted.GR2 wGR.AM wGR.GM
Weighted Lehmann-Romano Procedureweighted.LR weighted.LR2 wLR.AM wLR.GM
Weighted Poisson-Binomial Procedureweighted.PB weighted.PB2 wPB.AM wPB.GM